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  5. AMTR_s00069p00056230

AMTR_s00069p00056230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.34

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG_01_0001593 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001593_tree ,
OG_02_0002111 (LandPlants) Phylogenetic Tree(s): OG_02_0002111_tree ,
OG_03_0008361 (SeedPlants) Phylogenetic Tree(s): OG_03_0008361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00056230
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023777001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
MA_10435772g0010 No alias Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza... 0.02 Archaeplastida
MA_10435772g0020 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e002137_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
GSVIVT01023777001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
LOC_Os10g37730.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Zm00001e002137_P001 No alias RING-HC-class E3 ligase 0.02 LandPlants
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.02 SeedPlants
LOC_Os10g37730.1 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 110 205
IPR020683 Ankyrin_rpt-contain_dom 14 107
No external refs found!