AMTR_s00069p00056230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.34

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG_01_0001593 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001593_tree ,
OG_02_0002111 (LandPlants) Phylogenetic Tree(s): OG_02_0002111_tree ,
OG_03_0008361 (SeedPlants) Phylogenetic Tree(s): OG_03_0008361_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00056230
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023777001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
MA_10435772g0010 No alias Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza... 0.02 Archaeplastida
MA_10435772g0020 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e002137_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
GSVIVT01023777001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
LOC_Os10g37730.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Zm00001e002137_P001 No alias RING-HC-class E3 ligase 0.02 LandPlants
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.02 SeedPlants
LOC_Os10g37730.1 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 110 205
IPR020683 Ankyrin_rpt-contain_dom 14 107
No external refs found!