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Aliases : ATGLK1, GPRI1, GLK1
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor
Gene families : OG0001485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001485_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00133630 | ATGLK1, GPRI1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00149p00035260 | APRR2, PRR2,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G44190 | GPRI2, ATGLK2, GLK2 | GOLDEN2-like 2 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g009495 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082563 | GPRI2, ATGLK2, GLK2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102994 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12665 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08837 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19818 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33376.t2 | GPRI2, ATGLK2,... | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene33376.t3 | GPRI2, ATGLK2,... | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009757 | GPRI2, ATGLK2, GLK2 | not classified & original description: CDS=44-1300 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0487.g073465 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g27832 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G106700.1 | GPRI2, ATGLK2,... | not classified & original description: pacid=50592712... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G061900.1 | GPRI2, ATGLK2,... | GARP subgroup GLK transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G073900.1 | GPRI2, ATGLK2,... | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16068 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g10175 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18073 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g13740.1 | ATGLK1, GPRI1,... | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g24070.1 | ATGLK1, GPRI1,... | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07798 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g26344 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g32592 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g36232 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04237 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18892 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61854 | ATGLK1, GPRI1, GLK1 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007417 | GPRI2, ATGLK2, GLK2 | not classified & original description: CDS=910-2184 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008347 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g04268 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g10621 | No alias | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25232 | No alias | GARP subgroup GLK transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo428906 | APRR2, PRR2 | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g061030.3.1 | APRR2, PRR2,... | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11464 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g26427 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50632 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51768 | GPRI2, ATGLK2, GLK2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14653 | APRR2, PRR2 | GARP subgroup GLK transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016357_P002 | ATGLK1, GPRI1,... | G2-like GARP transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e036073_P002 | GPRI2, ATGLK2,... | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 97 | 146 |
| No external refs found! |