GSVIVT01020424001 (RNPS1, SR45)

Aliases : RNPS1, SR45

Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component

Gene families : OG0002814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002814_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01020424001
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00150630	RNPS1, SR45,...	RNA processing.RNA quality control Exon Junction complex...	0.03	OrthoFinder output from all 47 species
Cre03.g164950	RNPS1, SR45	RNA processing.RNA quality control Exon Junction complex...	0.02	OrthoFinder output from all 47 species
LOC_Os01g72890.1	RNPS1, SR45,...	component RNPS1 of RNA quality control Exon Junction complex	0.05	OrthoFinder output from all 47 species
Solyc10g005590.4.1	RNPS1, SR45,...	component RNPS1 of RNA quality control Exon Junction complex	0.05	OrthoFinder output from all 47 species
Zm00001e018566_P001	RNPS1, SR45,...	component RNPS1 of RNA quality control Exon Junction complex	0.04	OrthoFinder output from all 47 species
Zm00001e028289_P001	RNPS1, SR45,...	component RNPS1 of RNA quality control Exon Junction complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	106	174

External Links

No external refs found!