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  5. GSVIVT01020167001

GSVIVT01020167001 (CYCD1;1, ATCYCD1;1)


Aliases : CYCD1;1, ATCYCD1;1

Description : Cell cycle.regulation.cyclins.CYCD-type cyclin


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020167001

Target Alias Description ECC score Gene Family Method Actions
Als_g03626 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene72055.t1 CYCD3, CYCD3;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g25199 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G062700.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.14G055100.1 CYCD3;3, Ceric.14G055100 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G003500.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g04581 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g12697 ATCYCD2;1, CYCD2;1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37830 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
MA_69479g0020 CYCD3, CYCD3;1 cyclin (CYCD) 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014839 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Solyc04g078470.3.1 CYCD3;3, Solyc04g078470 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e033498_P001 CYCD3;3, Zm00001e033498 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 174 275
IPR006671 Cyclin_N 44 171
No external refs found!