GSVIVT01020091001 (CRR28)

Aliases : CRR28

Description : RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CRR28 RNA editing factor

Gene families : OG0025604 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0025604_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01020091001

Target	Alias	Description	ECC score	Gene Family Method
AT1G59720	CRR28	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	OrthoFinder output from all 47 species
LOC_Os07g09370.1	CRR28, LOC_Os07g09370	RNA editing factor (CRR28)	0.04	OrthoFinder output from all 47 species
Zm00001e011417_P001	CRR28, Zm00001e011417	RNA editing factor (CRR28)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	458	583
IPR002885	Pentatricopeptide_repeat	256	282
IPR002885	Pentatricopeptide_repeat	357	382
IPR002885	Pentatricopeptide_repeat	195	222
IPR002885	Pentatricopeptide_repeat	167	192
IPR002885	Pentatricopeptide_repeat	285	311
IPR002885	Pentatricopeptide_repeat	92	122

External Links

No external refs found!