- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATUBC2, UBC2
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein
Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01020056001 | |
| Cluster | HCCA: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00126660 | ATUBC2, UBC2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G14400 | ATUBC1, UBC1 | ubiquitin carrier protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G62540 | UBC3 | ubiquitin-conjugating enzyme 3 | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13260 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene56299.t1 | ATUBC1, UBC1,... | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g294850 | ATUBC1, UBC1 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_26842 | ATUBC1, UBC1 | ubiquitin-conjugating E2 protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g57790.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os07g07240.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17960.1 | ATUBC1, UBC1 | ubiquitin-conjugating E2 protein | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g03370 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006114 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g067420.3.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g070980.3.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 47 | 183 |
| No external refs found! |