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  5. GSVIVT01020014001

GSVIVT01020014001


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020014001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT4G14368 No alias Regulator of chromosome condensation (RCC1) family protein 0.05 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72134.t1 Aspi01Gene72134 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G040000.1 Ceric.09G040000 not classified & original description: pacid=50586756... 0.03 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Len_g02424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 394 426
IPR000408 Reg_chr_condens 310 359
No external refs found!