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  5. GSVIVT01019972001

GSVIVT01019972001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019972001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Adi_g021049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12129 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g39751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_110029g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g25986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g050040.4.1 ATCRT1, Solyc01g050040 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010857_P001 Zm00001e010857 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 232 274
No external refs found!