GSVIVT01019787001 (RH8, ATRH8)

Aliases : RH8, ATRH8

Description : DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana

Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01019787001

Target	Alias	Description	ECC score	Gene Family Method
AT4G00660	RH8, ATRH8	RNAhelicase-like 8	0.06	OrthoFinder output from all 47 species
Adi_g075137	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02137	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0005.g009123	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original...	0.03	OrthoFinder output from all 47 species
Dac_g00876	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08850	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g12091	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os04g45040.3	RH8, ATRH8,...	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Len_g13816	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02022	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
MA_7069g0010	RH8, ATRH8	DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Mp7g14570.1	RH8, ATRH8	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
Pir_g00579	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12186	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03368	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	89	253
IPR001650	Helicase_C	290	396

External Links

No external refs found!

GSVIVT01019787001 (RH8, ATRH8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation