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  5. GSVIVT01019782001

GSVIVT01019782001


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019782001

Target Alias Description ECC score Gene Family Method Actions
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.04 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.03 OrthoFinder output from all 47 species
Dac_g12522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033709001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04458 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_20633 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_123836g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g39952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 142
No external refs found!