Aliases : SPO11-2
Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a (SPO11)
Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019418001 | |
Cluster | HCCA: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene50322.t1 | SPO11-2, Aspi01Gene50322 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g17610.1 | BIN5, RHL2,... | DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp.... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g35089 | BIN5, RHL2 | component *(TOP6A) of somatic DNA topoisomerase VI... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003824 | catalytic activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0006259 | DNA metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
BP | GO:0006879 | cellular iron ion homeostasis | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007049 | cell cycle | IEP | HCCA |
MF | GO:0008199 | ferric iron binding | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051321 | meiotic cell cycle | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013049 | Spo11/TopoVI_A_N | 93 | 158 |
No external refs found! |