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  5. GSVIVT01019060001

GSVIVT01019060001 (AtCRT3, EBS2, CRT3, PSL1)


Aliases : AtCRT3, EBS2, CRT3, PSL1

Description : Protein modification.protein folding and quality control.N-glycan-dependent machinery.CNX-CRT cycle.CRT lectin chaperone


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019060001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G08450 AtCRT3, EBS2, CRT3, PSL1 calreticulin 3 0.11 OrthoFinder output from all 47 species
Dac_g16109 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37391 AtCRT3, EBS2, CRT3, PSL1 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g67054.1 AtCRT3, EBS2,... lectin chaperone (CRT) 0.07 OrthoFinder output from all 47 species
LOC_Os05g43170.1 AtCRT3, EBS2,... lectin chaperone (CRT) 0.07 OrthoFinder output from all 47 species
MA_139086g0010 AtCRT3, EBS2, CRT3, PSL1 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
Solyc04g048900.3.1 AtCRT3, EBS2,... lectin chaperone (CRT) 0.15 OrthoFinder output from all 47 species
Zm00001e032082_P001 AtCRT3, EBS2,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 52 288
IPR001580 Calret/calnex 289 362
No external refs found!