Aliases : ATDCL2, DCL2
Description : RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019052001 | |
Cluster | HCCA: Cluster_100 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.1Z320500.1 | DCL1, CAF,... | not classified & original description: pacid=50576981... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g06763 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.02 | OrthoFinder output from all 47 species | |
MA_10432726g0010 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
MA_108060g0010 | DCL1, CAF,... | Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp.... | 0.05 | OrthoFinder output from all 47 species | |
Mp7g11720.1 | DCL4, ATDCL4 | endoribonuclease (DCL3). endoribonuclease (DCL4) | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g005030.4.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4). component DRB7 of DRB4-DRB7.1... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g067200.2.1 | ATDCL3, DCL3,... | Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016787 | hydrolase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
No external refs found! |