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  5. GSVIVT01018853001

GSVIVT01018853001 (BGAL3)


Aliases : BGAL3

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018853001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00246870 BGAL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00032p00109160 BGAL8,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00054p00149030 BGAL6, MUM2,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00136p00108810 BGAL1,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00054750 BGAL13,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.09 OrthoFinder output from all 47 species
AMTR_s00175p00032740 BGAL8,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
AT1G45130 BGAL5 beta-galactosidase 5 0.03 OrthoFinder output from all 47 species
AT2G16730 BGAL13 glycosyl hydrolase family 35 protein 0.03 OrthoFinder output from all 47 species
AT4G26140 BGAL12 beta-galactosidase 12 0.03 OrthoFinder output from all 47 species
AT4G36360 BGAL3 beta-galactosidase 3 0.02 OrthoFinder output from all 47 species
Adi_g021150 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11760 BGAL9 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19108 BGAL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28360.t1 BGAL8, Aspi01Gene28360 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28377.t1 BGAL1, Aspi01Gene28377 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59928.t1 BGAL8, Aspi01Gene59928 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000116 BGAL1 EC_3.2 glycosylase & original description: CDS=172-2628 0.03 OrthoFinder output from all 47 species
Ceric.34G073600.1 BGAL3, Ceric.34G073600 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09601 BGAL8 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05067 BGAL9 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09977 BGAL8 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g24827 BGAL8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005849001 BGAL8 Beta-galactosidase 6 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
GSVIVT01006709001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01008835001 BGAL16 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01024031001 BGAL13 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01033736001 BGAL7 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 OrthoFinder output from all 47 species
Gb_12091 BGAL1 beta-galactosidase (BGAL) 0.09 OrthoFinder output from all 47 species
Gb_40554 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Gb_41532 BGAL10 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.11 OrthoFinder output from all 47 species
LOC_Os01g39830.1 BGAL1, LOC_Os01g39830 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
LOC_Os01g65460.1 BGAL10, LOC_Os01g65460 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g12730.1 BGAL1, LOC_Os02g12730 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
LOC_Os06g37560.1 BGAL1, LOC_Os06g37560 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42310.1 BGAL15, LOC_Os06g42310 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
LOC_Os08g43570.1 BGAL13, LOC_Os08g43570 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os09g36810.1 BGAL13, LOC_Os09g36810 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Len_g09086 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37627 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15821 BGAL8 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17313 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427427g0010 BGAL1 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
MA_11388g0010 BGAL1 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_665188g0010 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Msp_g24966 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26275 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30000 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35159 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39086 BGAL1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011417 BGAL1 EC_3.2 glycosylase & original description: CDS=435-2606 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018931 BGAL8 EC_3.2 glycosylase & original description: CDS=111-2597 0.03 OrthoFinder output from all 47 species
Solyc01g111540.4.1 BGAL13, Solyc01g111540 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
Solyc02g078950.4.1 BGAL8, Solyc02g078950 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Solyc02g084720.3.1 BGAL3, Solyc02g084720 beta-galactosidase (BGAL) 0.14 OrthoFinder output from all 47 species
Solyc06g062580.3.1 BGAL1, Solyc06g062580 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Solyc10g055470.2.1 BGAL13, Solyc10g055470 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Zm00001e000496_P002 BGAL3, Zm00001e000496 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Zm00001e010258_P001 BGAL11, Zm00001e010258 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.06 OrthoFinder output from all 47 species
Zm00001e024694_P002 BGAL13, Zm00001e024694 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e037281_P001 BGAL1, Zm00001e037281 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e039014_P001 BGAL3, Zm00001e039014 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 763 840
IPR031330 Gly_Hdrlase_35_cat 35 339
No external refs found!