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  5. GSVIVT01018803001

GSVIVT01018803001 (GMD2, MUR1, MUR_1)


Aliases : GMD2, MUR1, MUR_1

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-L-fucose synthesis.de novo biosynthesis.GDP-D-mannose 4,6-dehydratase


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018803001
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT5G66280 GMD1 GDP-D-mannose 4,6-dehydratase 1 0.05 OrthoFinder output from all 47 species
Aev_g12259 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12260 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55017 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28531 GMD1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Lfl_g05274 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g09600.1 GMD2, MUR1, MUR_1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Solyc02g084210.1.1 GMD1, Solyc02g084210 GDP-D-mannose 4,6-dehydratase (MUR1) 0.04 OrthoFinder output from all 47 species
Spa_g07271 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 31 193
IPR016040 NAD(P)-bd_dom 234 265
No external refs found!