Aliases : RPN10, MCB1, ATMCB1, MBP1
Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component
Gene families : OG0003945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003945_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01018756001 | |
Cluster | HCCA: Cluster_95 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g054058 | RPN10, MCB1, ATMCB1, MBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g13761 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Als_g17447 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g00617 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G050400.1 | RPN10, MCB1,... | regulatory component *(RPN10) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000829.9 | RPN10, MCB1, ATMCB1, MBP1 | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g663500 | RPN10, MCB1, ATMCB1, MBP1 | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
Gb_09279 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component RPN10 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g13970.1 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
MA_10428946g0010 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component RPN10 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
MA_10429598g0010 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component RPN10 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g083710.3.1 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001011_P001 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038598_P003 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
CC | GO:0031011 | Ino80 complex | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | HCCA |
BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | HCCA |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
CC | GO:0097346 | INO80-type complex | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1904949 | ATPase complex | IEP | HCCA |
No external refs found! |