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  5. GSVIVT01018636001

GSVIVT01018636001 (RIN2)


Aliases : RIN2

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0003335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018636001

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0010.g012172 RIN2 E3 ubiquitin ligase *(RIN) & original description: CDS=1-1902 0.04 OrthoFinder output from all 47 species
LOC_Os07g30100.1 RIN2, LOC_Os07g30100 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Lfl_g03243 RIN3 E3 ubiquitin ligase *(RIN) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430751g0010 RIN2 E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g40866 RIN2 E3 ubiquitin ligase *(RIN) & original description: none 0.02 OrthoFinder output from all 47 species
Smo42421 RIN2 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Spa_g18882 RIN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010369_P001 RIN2, Zm00001e010369 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 336 380
IPR003892 CUE 551 587
No external refs found!