GSVIVT01018392001 (APO1)


Aliases : APO1

Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018392001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Adi_g022368 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75124 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08716 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09606 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41978 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03861 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26163 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29513 APO1 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_36551 emb1629, APO2 APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52520.4 APO1, LOC_Os04g52520 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g20099 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
MA_931234g0010 APO1 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g01145 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00805 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26504 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13449 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03107 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04458 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009377 emb1629, APO2 organelle RNA splicing factor *(APO) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012737 APO1 organelle RNA splicing factor *(APO) & original... 0.04 OrthoFinder output from all 47 species
Sam_g17813 No alias organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17814 No alias organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080250.4.1 APO1, Solyc08g080250 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g009400.4.1 APO3, Solyc09g009400 APO protein 3, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e006942_P002 APO1, Zm00001e006942 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e023481_P001 emb1629, APO2,... APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023342 APO_dom 70 268
IPR023342 APO_dom 310 422
No external refs found!