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  5. GSVIVT01018224001

GSVIVT01018224001 (ATG3, ATATG3)


Aliases : ATG3, ATATG3

Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein


Gene families : OG0004602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018224001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Aev_g03034 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.02 OrthoFinder output from all 47 species
Als_g18442 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.104 ATG3, ATATG3 Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 OrthoFinder output from all 47 species
Cre02.g102350 ATG3, ATATG3 Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 OrthoFinder output from all 47 species
Len_g11974 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.04 OrthoFinder output from all 47 species
Lfl_g05969 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.02 OrthoFinder output from all 47 species
Nbi_g05191 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.03 OrthoFinder output from all 47 species
Sam_g29084 No alias autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.02 OrthoFinder output from all 47 species
Zm00001e000371_P001 ATG3, ATATG3,... ATG3 autophagosome ATG8-conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e007685_P001 ATG3, ATATG3,... ATG3 autophagosome ATG8-conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e037871_P001 ATG3, ATATG3,... ATG3 autophagosome ATG8-conjugation E2 protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR007135 Atg3/Atg10 200 260
No external refs found!