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  5. GSVIVT01018133001

GSVIVT01018133001


Description : Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein


Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: GSVIVT01018133001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00232980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.04 OrthoFinder output from all 47 species
Adi_g067633 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Adi_g071882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g48943 No alias endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
Ceric.26G060700.1 Ceric.26G060700 endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.11 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 OrthoFinder output from all 47 species
Dcu_g03193 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Ehy_g07893 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
LOC_Os05g43280.1 LOC_Os05g43280 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 OrthoFinder output from all 47 species
LOC_Os12g40520.1 LOC_Os12g40520 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Lfl_g10345 No alias endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 OrthoFinder output from all 47 species
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 OrthoFinder output from all 47 species
Ore_g36306 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Pir_g46286 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018228 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sam_g08395 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Solyc03g005430.4.1 Solyc03g005430 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Tin_g12910 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Zm00001e003140_P001 Zm00001e003140 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Zm00001e027387_P004 Zm00001e027387 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 OrthoFinder output from all 47 species
Zm00001e032087_P004 Zm00001e032087 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 74 191
No external refs found!