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  5. GSVIVT01018081001

GSVIVT01018081001 (GME)


Aliases : GME

Description : Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.GDP-D-mannose-epimerase (GME)


Gene families : OG0002260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018081001
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT5G28840 GME GDP-D-mannose 3',5'-epimerase 0.01 OrthoFinder output from all 47 species
Adi_g088026 GME EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07184 GME EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07756 GME EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g28200.1 GME, LOC_Os10g28200 GDP-D-mannose-epimerase (GME) 0.02 OrthoFinder output from all 47 species
LOC_Os11g37890.1 GME, LOC_Os11g37890 GDP-D-mannose-epimerase (GME) 0.03 OrthoFinder output from all 47 species
Smo128181 GME Redox homeostasis.low-molecular-weight... 0.03 OrthoFinder output from all 47 species
Tin_g09237 GME EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0050662 obsolete coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 2 149
No external refs found!