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  5. GSVIVT01018051001

GSVIVT01018051001 (ARLIM15, DMC1, ATDMC1)


Aliases : ARLIM15, DMC1, ATDMC1

Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018051001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0094.g043383 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.01 OrthoFinder output from all 47 species
Dcu_g45185 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09185 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021196 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.04 OrthoFinder output from all 47 species
Smo408953 RAD51, ATRAD51 DNA repair protein RAD51 homolog OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Spa_g49520 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020831_P002 ARLIM15, DMC1,... recombinase (DMC1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 91 345
No external refs found!