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  5. GSVIVT01017932001

GSVIVT01017932001 (LACS6, ATLACS6)


Aliases : LACS6, ATLACS6

Description : Lipid metabolism.lipid degradation.fatty acid degradation.peroxisomal long-chain acyl-CoA synthetase


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017932001

Target Alias Description ECC score Gene Family Method Actions
AT1G64400 LACS3 AMP-dependent synthetase and ligase family protein 0.05 OrthoFinder output from all 47 species
AT4G11030 No alias AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
AT4G23850 LACS4 AMP-dependent synthetase and ligase family protein 0.05 OrthoFinder output from all 47 species
Adi_g114074 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Als_g03807 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g03531 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Ceric.1Z191000.1 LACS4, Ceric.1Z191000 not classified & original description: pacid=50613630... 0.02 OrthoFinder output from all 47 species
Ceric.33G045300.1 LACS6, ATLACS6,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Cre12.g507400 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.04 OrthoFinder output from all 47 species
Dcu_g08877 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g14353 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Gb_09959 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g04990.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.05 OrthoFinder output from all 47 species
Lfl_g33128 LACS4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432761g0010 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g16310.1 LACS6, ATLACS6 peroxisomal long-chain acyl-CoA synthetase 0.04 OrthoFinder output from all 47 species
Pnu_g31368 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g15770 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g099100.4.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.03 OrthoFinder output from all 47 species
Solyc08g082280.4.1 LACS4, Solyc08g082280 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039185_P005 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 109 551
IPR025110 AMP-bd_C 561 603
No external refs found!