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  5. GSVIVT01017841001

GSVIVT01017841001


Description : Protein modification.hydroxylation.prolyl hydroxylase


Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017841001

Target Alias Description ECC score Gene Family Method Actions
Adi_g012960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g41271 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02767 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g369300 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.03 OrthoFinder output from all 47 species
Ehy_g07514 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16105 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18942 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080530.3.1 Solyc01g080530 prolyl hydroxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003582 ShKT_dom 257 298
IPR005123 Oxoglu/Fe-dep_dioxygenase 124 244
No external refs found!