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  5. GSVIVT01017816001

GSVIVT01017816001 (PVA12)


Aliases : PVA12

Description : Vesicle-associated protein 1-2 OS=Arabidopsis thaliana


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017816001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00209140 evm_27.TU.AmTr_v1... Vesicle-associated protein 2-1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g085923 PVA12 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Cba_g21723 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Dcu_g35384 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.1 OrthoFinder output from all 47 species
LOC_Os04g45190.3 PVA12, LOC_Os04g45190 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
LOC_Os04g46780.1 LOC_Os04g46780 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
LOC_Os10g40140.1 LOC_Os10g40140 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
MA_56506g0010 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.08 OrthoFinder output from all 47 species
Nbi_g06542 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Pir_g21817 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g007390.2.1 PVA12, Solyc08g007390 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e040240_P001 Zm00001e040240 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 4 107
No external refs found!