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Description : Protein CHUP1, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01017698001 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00113980 | evm_27.TU.AmTr_v1... | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00147p00070270 | CHUP1,... | Cytoskeleton.cp-actin-dependent plastid movement.CHUP... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G07120 | No alias | FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... | 0.15 | OrthoFinder output from all 47 species | |
| AT1G48280 | No alias | hydroxyproline-rich glycoprotein family protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g50900 | CHUP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03546 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03133.t1 | CHUP1, Aspi01Gene03133 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene56684.t1 | CHUP1, Aspi01Gene56684 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04082 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24662 | CHUP1 | motility factor *(CHUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g36486 | CHUP1 | motility factor *(CHUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22192 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024701001 | No alias | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08802 | CHUP1 | regulatory protein (IPGA) of cortical microtubule organisation | 0.06 | OrthoFinder output from all 47 species | |
| Gb_35748 | CHUP1 | regulatory protein (IPGA) of cortical microtubule organisation | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g46340.1 | LOC_Os01g46340 | regulatory protein (IPGA) of cortical microtubule organisation | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g03560.1 | CHUP1, LOC_Os08g03560 | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_5633g0010 | CHUP1 | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g069560.3.1 | CHUP1, Solyc02g069560 | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g09352 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39670 | CHUP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g25235 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001328_P002 | Zm00001e001328 | Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e020303_P001 | Zm00001e020303 | regulatory protein (IPGA) of cortical microtubule organisation | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |