GSVIVT01017696001 (PGP11)

Aliases : PGP11

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01017696001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00018p00193700	ABCB14,...	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00018p00193820	PGP1, ABCB1,...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109790	PGP11,...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
AT3G28380	PGP17	P-glycoprotein 17	0.04	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.07	OrthoFinder output from all 47 species
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.03	OrthoFinder output from all 47 species
Aev_g30925	PGP3, MDR3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g11046	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12320.t1	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15960.t1	Aspi01Gene15960	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62048.t1	PGP2, Aspi01Gene62048	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.35G032800.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G047700.1	Ceric.36G047700	not classified & original description: pacid=50569224...	0.04	OrthoFinder output from all 47 species
Dcu_g08511	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25899	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08692	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_01718	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.07	OrthoFinder output from all 47 species
Gb_06993	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_10215	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Len_g04845	PGP20	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
MA_10280832g0010	PGP11	ABC transporter B family member 7 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
MA_76406g0010	ATPGP4, PGP4, ABCB4, MDR4	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_9148200g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g42643	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20355	PGP21	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g30303	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.03	OrthoFinder output from all 47 species
Solyc03g005860.4.1	PGP11, Solyc03g005860	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Tin_g12815	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e008749_P001	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Zm00001e041087_P002	Zm00001e041087	subfamily ABCB transporter	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	578	730
IPR011527	ABC1_TM_dom	1	274
IPR011527	ABC1_TM_dom	1685	1953
IPR011527	ABC1_TM_dom	1095	1367
IPR003439	ABC_transporter-like_ATP-bd	343	388
IPR003439	ABC_transporter-like_ATP-bd	1438	1585
IPR003439	ABC_transporter-like_ATP-bd	2027	2175
IPR003439	ABC_transporter-like_ATP-bd	801	926
IPR003439	ABC_transporter-like_ATP-bd	401	451

External Links

No external refs found!

GSVIVT01017696001 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation