1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01017686001

GSVIVT01017686001


No description available


Gene families : OG0000018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017686001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00028660 No alias No description available 0.03 OrthoFinder output from all 47 species
AT1G79740 No alias hAT transposon superfamily 0.03 OrthoFinder output from all 47 species
Adi_g108674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g126637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64994.t1 Aspi01Gene64994 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g030510.4.1 Solyc06g030510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g007470.2.1 Solyc08g007470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g18278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 353 504
IPR008906 HATC_C_dom 724 794
IPR003656 Znf_BED 143 178
IPR003656 Znf_BED 17 53
No external refs found!