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  5. GSVIVT01017643001

GSVIVT01017643001


No description available


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017643001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00700p00004930 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.18 OrthoFinder output from all 47 species
AT4G17140 No alias pleckstrin homology (PH) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011871 No alias not classified & original description: CDS=1-5496 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.03 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.07 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.11 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.11 OrthoFinder output from all 47 species
Cre12.g483500 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre17.g728250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_23775 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41560.1 LOC_Os10g41560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g12905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g16274 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g02430 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005700 No alias not classified & original description: CDS=17-12964 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.05 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g077500.4.1 Solyc08g077500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g09459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024724_P001 Zm00001e024724 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR031645 VPS13_DH-like 3893 3996
IPR031646 VPS13_extend_chorein 192 436
IPR009543 VPS13_VAB 3336 3645
IPR009291 Vps62 2074 2243
IPR009291 Vps62 2328 2469
IPR000008 C2_dom 2721 2832
IPR026854 VPS13-like_N 2 115
IPR031642 VPS13_mid_RBG 630 857
IPR010482 Peroxin 2979 3096
No external refs found!