LOC_Os04g23820.1


Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica (sp|q9zts1|sym_orysj : 148.0)


Gene families : OG_01_0001682 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001682_tree ,
OG_02_0007870 (LandPlants) Phylogenetic Tree(s): OG_02_0007870_tree ,
OG_03_0009675 (SeedPlants) Phylogenetic Tree(s): OG_03_0009675_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g23820.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Cre01.g046652 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Cre08.g364650 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
MA_169555g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e040540_P001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_169555g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.02 LandPlants
Zm00001e040540_P001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 LandPlants
MA_169555g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e040540_P001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 97 191
No external refs found!