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  5. GSVIVT01017472001

GSVIVT01017472001


No description available


Gene families : OG0003094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017472001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Als_g60534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g39970.1 LOC_Os02g39970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g117420.4.1 Solyc03g117420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007650_P002 Zm00001e007650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 472 532
IPR001611 Leu-rich_rpt 328 342
IPR001611 Leu-rich_rpt 375 396
IPR001611 Leu-rich_rpt 181 203
IPR001611 Leu-rich_rpt 230 252
IPR001611 Leu-rich_rpt 447 463
IPR001611 Leu-rich_rpt 351 369
IPR001611 Leu-rich_rpt 155 178
IPR001611 Leu-rich_rpt 133 152
IPR001611 Leu-rich_rpt 400 420
No external refs found!