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  5. GSVIVT01017340001

GSVIVT01017340001 (PIFI)


Aliases : PIFI

No description available


Gene families : OG0008080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017340001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00098970 PIFI,... No description available 0.07 OrthoFinder output from all 47 species
AT3G15840 PIFI post-illumination chlorophyll fluorescence increase 0.07 OrthoFinder output from all 47 species
Aev_g11411 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31937 PIFI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01558 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01632 PIFI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G104100.1 PIFI, Ceric.02G104100 not classified & original description: pacid=50584792... 0.03 OrthoFinder output from all 47 species
Dac_g08630 PIFI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g02647 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04409 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g38950.1 PIFI, LOC_Os03g38950 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g04157 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05205 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g23110.1 PIFI no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g19672 PIFI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15669 PIFI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08562 PIFI not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g11222 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13671 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16426 PIFI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008701 PIFI not classified & original description: CDS=204-1073 0.03 OrthoFinder output from all 47 species
Sam_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo127024 PIFI No description available 0.05 OrthoFinder output from all 47 species
Solyc12g042770.3.1 PIFI, Solyc12g042770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g07177 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06416 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004906_P001 PIFI, Zm00001e004906 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e012478_P001 PIFI, Zm00001e012478 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!