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  5. GSVIVT01017313001

GSVIVT01017313001


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.LOLITA component


Gene families : OG0006358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017313001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Aev_g02884 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cre12.g561200 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Dcu_g46434 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Ehy_g22931 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g00255 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Msp_g19583 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g04528 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008808 No alias not classified & original description: CDS=1-627 0.03 OrthoFinder output from all 47 species
Solyc06g068080.4.1 Solyc06g068080 component LOLITA of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Spa_g14637 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Tin_g05370 No alias component *(LOLITA) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e006410_P001 Zm00001e006410 component LOLITA of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 2 136
No external refs found!