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No description available
Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01017246001 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00144740 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT5G11240 | No alias | transducin family protein / WD-40 repeat family protein | 0.11 | OrthoFinder output from all 47 species | |
| Als_g47262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11203 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene62302.t1 | Aspi01Gene62302 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g024031 | No alias | not classified & original description: CDS=168-2150 | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z072200.1 | Ceric.1Z072200 | not classified & original description: pacid=50586493... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000123.23 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| Cre12.g538500 | No alias | No description available | 0.19 | OrthoFinder output from all 47 species | |
| Dcu_g09409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02665 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29253 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g46060.1 | LOC_Os01g46060 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g18840.1 | LOC_Os03g18840 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Mp5g00060.1 | No alias | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Pp3c7_70V3.1 | Pp3c7_70 | transducin family protein / WD-40 repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36919 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo404454 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g116380.4.1 | Solyc03g116380 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g02088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001372_P001 | Zm00001e001372 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| CC | GO:0034457 | Mpp10 complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |