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  5. GSVIVT01017186001

GSVIVT01017186001 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum


Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017186001
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00092370 evm_27.TU.AmTr_v1... ABC transporter G family member 32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Als_g39978 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19902 PDR6, ATPDR6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36860 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43789 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58126 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67685 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G068400.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Gb_33044 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g21350.1 PDR6, ATPDR6,... ABC transporter G family member 40 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g16458.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_10429218g0010 PDR6, ATPDR6 Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
MA_214577g0010 ABCG40, PDR12,... ABC transporter G family member 40 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g31869 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61713 PDR6, ATPDR6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37248 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!