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  5. GSVIVT01017112001

GSVIVT01017112001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017112001

Target Alias Description ECC score Gene Family Method Actions
AT1G54060 ASIL1 6B-interacting protein 1-like 1 0.04 OrthoFinder output from all 47 species
AT3G11100 No alias sequence-specific DNA binding transcription factors 0.03 OrthoFinder output from all 47 species
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.03 OrthoFinder output from all 47 species
MA_4997g0010 No alias transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
MA_8003390g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Mp7g12800.1 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Nbi_g12848 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27310 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12035 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo440669 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Solyc03g122030.1.1 Solyc03g122030 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Solyc12g043090.3.1 Solyc12g043090 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!