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  5. GSVIVT01017107001

GSVIVT01017107001


No description available


Gene families : OG0002453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017107001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G20720 No alias RAD3-like DNA-binding helicase protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene31350.t1 Aspi01Gene31350 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G032600.1 Ceric.16G032600 dsDNA helicase *(FANCJ) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G041000.1 Ceric.20G041000 regulatory helicase *(RTEL) & original description:... 0.09 OrthoFinder output from all 47 species
Cre02.g089608 No alias Regulator of telomere elongation helicase 1 homolog... 0.05 OrthoFinder output from all 47 species
Gb_04351 No alias Regulator of telomere elongation helicase 1 homolog... 0.02 OrthoFinder output from all 47 species
Gb_36663 No alias Regulator of telomere elongation helicase 1 homolog... 0.04 OrthoFinder output from all 47 species
LOC_Os01g40980.1 LOC_Os01g40980 Regulator of telomere elongation helicase 1 homolog... 0.07 OrthoFinder output from all 47 species
MA_10436237g0010 No alias Regulator of telomere elongation helicase 1 homolog... 0.03 OrthoFinder output from all 47 species
MA_959247g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo77246 No alias Regulator of telomere elongation helicase 1 homolog... 0.04 OrthoFinder output from all 47 species
Solyc10g079510.3.1 Solyc10g079510 Regulator of telomere elongation helicase 1 homolog... 0.05 OrthoFinder output from all 47 species
Tin_g31760 No alias regulatory helicase *(RTEL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020587_P002 Zm00001e020587 Regulator of telomere elongation helicase 1 homolog... 0.02 OrthoFinder output from all 47 species
Zm00001e034917_P001 Zm00001e034917 Regulator of telomere elongation helicase 1 homolog... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!