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  5. GSVIVT01017087001

GSVIVT01017087001 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1

Description : Coenzyme metabolism.pyridoxalphosphate synthesis.pyridoxal 5-phosphate synthase complex.synthase component


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017087001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT3G16050 ATPDX1.2, A37, PDX1.2 pyridoxine biosynthesis 1.2 0.1 OrthoFinder output from all 47 species
Aev_g13246 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.07 OrthoFinder output from all 47 species
Aop_g07922 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Dac_g02107 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Gb_23607 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g01080.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
MA_10434121g0010 ATPDX1.2, A37, PDX1.2 synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
Spa_g00335 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.13 OrthoFinder output from all 47 species
Spa_g50024 ATPDX1.1, PDX1.1 synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 153 253
No external refs found!