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  5. GSVIVT01016782001

GSVIVT01016782001 (BRX-LIKE2, ATBRXL2)


Aliases : BRX-LIKE2, ATBRXL2

Description : Protein Brevis radix-like 2 OS=Arabidopsis thaliana


Gene families : OG0001788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016782001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00209000 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G31880 BRX, NLM9 DZC (Disease resistance/zinc finger/chromosome... 0.03 OrthoFinder output from all 47 species
Aop_g04131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14131.t2 BRX-LIKE2,... plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044260 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.05 OrthoFinder output from all 47 species
Cba_g36821 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Dac_g38726 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.05 OrthoFinder output from all 47 species
Dde_g00648 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022683001 BRX, NLM9 Protein BREVIS RADIX OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g63650.1 BRXL1, ATBRXL1,... Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os04g51172.1 BRXL1, ATBRXL1,... Putative protein Brevis radix-like 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Len_g36943 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
MA_10432467g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_481141g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Msp_g09684 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Pir_g14196 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Ppi_g54775 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005820 No alias not classified & original description: CDS=772-1503 0.03 OrthoFinder output from all 47 species
Sam_g31296 No alias plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Solyc07g041230.3.1 ATBRXL4, BRXL4,... Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g10454 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Spa_g51762 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Tin_g14618 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Zm00001e006397_P001 BRX, NLM9, Zm00001e006397 Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e007054_P001 BRX, NLM9, Zm00001e007054 Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Zm00001e007825_P003 BRX-LIKE2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e009904_P001 BRX-LIKE2,... Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e015552_P003 BRX, NLM9, Zm00001e015552 Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Zm00001e034288_P001 BRX-LIKE2,... Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027988 BRX_N 25 60
IPR013591 Brevis_radix_dom 315 370
IPR013591 Brevis_radix_dom 138 192
No external refs found!