GSVIVT01016596001

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.E-class RAB GTPase

Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016596001

Target	Alias	Description	ECC score	Gene Family Method
AT5G59840	No alias	Ras-related small GTP-binding family protein	0.04	OrthoFinder output from all 47 species
Adi_g117529	ATRABE1C,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g21954	ATRABE1C,...	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0125.g048540	ATRABE1C,...	E-class RAB GTPase & original description: CDS=167-790	0.04	OrthoFinder output from all 47 species
Azfi_s1239.g100218	ATRABE1C,...	E-class RAB GTPase & original description: CDS=257-895	0.03	OrthoFinder output from all 47 species
Ceric.28G011900.1	ATRABE1D,...	E-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
Cre15.g641800	ATRABE1D,...	GTP-binding protein yptV2 OS=Volvox carteri	0.03	OrthoFinder output from all 47 species
LOC_Os03g60530.1	ATRABE1C,...	E-class RAB GTPase	0.06	OrthoFinder output from all 47 species
LOC_Os05g38630.2	ATRABE1C,...	E-class RAB GTPase	0.04	OrthoFinder output from all 47 species
LOC_Os07g09680.1	ATRABE1E,...	E-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os07g13530.1	LOC_Os07g13530	E-class RAB GTPase	0.04	OrthoFinder output from all 47 species
Len_g16013	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g02703	ATRABE1E, ATRAB8E, RABE1e	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10433537g0020	ATRABE1D,...	Ras-related protein RABE1d OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g12190	ATRABE1D,...	E-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25496	ATRABE1D,...	E-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000647	ATRABE1D,...	not classified & original description: CDS=1-615	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010582	ATRABE1C,...	not classified & original description: CDS=1-537	0.04	OrthoFinder output from all 47 species
Sam_g30325	No alias	E-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g39848	No alias	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52144	No alias	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e006180_P001	ATRABE1C,...	E-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e011404_P001	ATRABE1C,...	E-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e033170_P001	ATRABE1C,...	E-class RAB GTPase	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	17	178

External Links

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GSVIVT01016596001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation