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  5. GSVIVT01016561001

GSVIVT01016561001


No description available


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016561001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171240 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G39670 No alias Radical SAM superfamily protein 0.13 OrthoFinder output from all 47 species
Adi_g114284 No alias RlmN-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23487 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12635 No alias RlmN-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0665.g081748 No alias RlmN-type rRNA methyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.08G040900.1 Ceric.08G040900 RlmN-type rRNA methyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.127 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre01.g028450 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre01.g043000 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g05839 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41070 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g45370.1 LOC_Os01g45370 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g74190.1 LOC_Os01g74190 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g06989 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04510.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g12660.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g21043 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14699 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11662 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025527 No alias RlmN-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Solyc05g005590.4.1 Solyc05g005590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g030570.3.1 Solyc06g030570 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 152 315
No external refs found!