GSVIVT01016538001 (OBP3)

Aliases : OBP3

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016538001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00153440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
AMTR_s00080p00087770	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
AMTR_s00160p00053540	DOF4.7,...	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
AMTR_s00169p00055880	OBP4,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.08	OrthoFinder output from all 47 species
AT1G21340	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT1G51700	ADOF1, DOF1	DOF zinc finger protein 1	0.02	OrthoFinder output from all 47 species
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.06	OrthoFinder output from all 47 species
AT3G55370	OBP3	OBF-binding protein 3	0.06	OrthoFinder output from all 47 species
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT4G21040	No alias	Dof-type zinc finger domain-containing protein	0.03	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.07	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g007394	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056971	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g081944	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086178	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g113667	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g24071	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06838	DAG1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g03156	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04849	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20563	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g14979	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene26374.t1	Aspi01Gene26374	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04480	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G055200.1	TMO6, Ceric.09G055200	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G014800.1	Ceric.11G014800	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.12G042700.1	TMO6, Ceric.12G042700	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.19G013700.1	TMO6, Ceric.19G013700	transcription factor *(DOF) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.20G020200.1	CDF1, Ceric.20G020200	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G037300.1	TMO6, Ceric.26G037300	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G046000.1	OBP4, Ceric.35G046000	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g37632	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g02219	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g29870	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04770	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12009	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_09675	CDF2	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Gb_12877	HCA2, DOF5.6	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Gb_20144	HCA2, DOF5.6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Gb_20867	CDF3	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os03g38870.1	LOC_Os03g38870	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os04g58190.1	LOC_Os04g58190	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g36900.1	LOC_Os05g36900	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g10120	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15959	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g56635	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_16692g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_459791g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_46520g0010	No alias	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
MA_56828g0010	No alias	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
MA_83624g0010	TMO6	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Msp_g15852	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g25677	DAG1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03879	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g26476	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33574	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g41458	OBP4	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32547	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g61204	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g43145	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g49468	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g076850.2.1	Solyc02g076850	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc02g078620.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc02g090310.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.11	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc05g054510.2.1	OBP3, Solyc05g054510	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g071480.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.1	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc11g066050.1.1	Solyc11g066050	transcription factor (DOF)	0.09	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Spa_g26148	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g54524	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g14914	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19759	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000526_P001	CDF3, Zm00001e000526	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e005785_P001	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e006190_P001	Zm00001e006190	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e010454_P001	TMO6, Zm00001e010454	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.09	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e018163_P001	Zm00001e018163	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.09	OrthoFinder output from all 47 species
Zm00001e023334_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e027634_P002	OBP3, Zm00001e027634	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0120009	intermembrane lipid transfer	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	74	130

External Links

No external refs found!

GSVIVT01016538001 (OBP3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation