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  5. GSVIVT01016512001

GSVIVT01016512001 (ATLAC17, LAC17)


Aliases : ATLAC17, LAC17

Description : Cell wall.lignin.monolignol conjugation and polymerization.lignin laccase


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016512001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00189700 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.04 OrthoFinder output from all 47 species
AMTR_s00055p00190270 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
AT5G03260 LAC11 laccase 11 0.04 OrthoFinder output from all 47 species
Aev_g25857 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aev_g39973 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Als_g51331 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27424.t1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g06300 LAC1, ATLAC1 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g13204 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dac_g16008 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g32195 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Dcu_g50324 LAC16 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
LOC_Os05g38420.1 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
Len_g24053 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Len_g50527 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g32357 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Pir_g37886 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g06428 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g23638 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g59159 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Solyc02g062660.2.1 LAC11, Solyc02g062660 Laccase-11 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc02g085120.3.1 LAC11, Solyc02g085120 Laccase-11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g043360.3.1 LAC7, Solyc05g043360 Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.03 OrthoFinder output from all 47 species
Solyc05g052370.3.1 LAC12, Solyc05g052370 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g049460.3.1 LAC7, Solyc07g049460 Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.03 OrthoFinder output from all 47 species
Solyc11g062440.2.1 Solyc11g062440 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
Spa_g09587 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.01 OrthoFinder output from all 47 species
Spa_g20904 LAC1, ATLAC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001354_P001 LAC5, Zm00001e001354 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 553 666
IPR011707 Cu-oxidase_N 32 145
IPR011706 Cu-oxidase_C 432 505
IPR011706 Cu-oxidase_C 951 1076
IPR001117 Cu-oxidase_2nd 157 308
IPR001117 Cu-oxidase_2nd 678 828
No external refs found!