GSVIVT01016501001 (RCA)

Aliases : RCA

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase

Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016501001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g060599	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Als_g03717	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Cba_g02574	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Cba_g15232	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.12G094300.1	RCA, Ceric.12G094300	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.12G094500.1	RCA, Ceric.12G094500	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.12G094700.1	RCA, Ceric.12G094700	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.12G094800.1	RCA, Ceric.12G094800	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.28G001900.1	RCA, Ceric.28G001900	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.28G002100.1	RCA, Ceric.28G002100	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
LOC_Os11g47970.1	RCA, LOC_Os11g47970	ATP-dependent activase involved in RuBisCo regulation	0.03	OrthoFinder output from all 47 species
Msp_g10333	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Pir_g66480	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Solyc09g011080.3.1	RCA, Solyc09g011080	ATP-dependent activase involved in RuBisCo regulation	0.03	OrthoFinder output from all 47 species
Tin_g03996	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Tin_g07636	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Zm00001e020928_P001	RCA, Zm00001e020928	ATP-dependent activase involved in RuBisCo regulation	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	164	305

External Links

No external refs found!

GSVIVT01016501001 (RCA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation