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  5. GSVIVT01016382001

GSVIVT01016382001


Description : RNA biosynthesis.transcriptional activation.LIM transcription factor


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016382001

Target Alias Description ECC score Gene Family Method Actions
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g006630 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046626 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077331 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04744 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37425 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15520 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03212 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27988 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g35930.1 LOC_Os10g35930 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 65
IPR001781 Znf_LIM 108 163
No external refs found!