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  5. GSVIVT01016368001

GSVIVT01016368001 (COI1)


Aliases : COI1

Description : Phytohormones.jasmonic acid.perception and signal transduction.receptor complex.COI-type component


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016368001

Target Alias Description ECC score Gene Family Method Actions
AT5G49980 AFB5 auxin F-box protein 5 0.03 OrthoFinder output from all 47 species
Adi_g005427 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023634 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053952 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107960 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Als_g06362 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17403.t1 COI1, Aspi01Gene17403 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g18581 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Gb_37967 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g15880.4 COI1, LOC_Os03g15880 component COI of jasmonic acid receptor complex 0.05 OrthoFinder output from all 47 species
Ore_g16353 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18805 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Spa_g18002 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e000649_P001 Zm00001e000649 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e015908_P001 Zm00001e015908 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e019255_P001 COI1, Zm00001e019255 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e023831_P001 Zm00001e023831 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!