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  5. GSVIVT01016357001

GSVIVT01016357001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0004039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016357001

Target Alias Description ECC score Gene Family Method Actions
Ceric.01G076400.1 Ceric.01G076400 regulatory protein of RNA homeostasis & original... 0.07 OrthoFinder output from all 47 species
Dcu_g01432 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01242 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g61830.1 LOC_Os01g61830 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g22385 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g03565 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g22082 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Zm00001e019376_P001 Zm00001e019376 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 215 265
No external refs found!