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  5. GSVIVT01016259001

GSVIVT01016259001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016259001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT2G38970 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.06 OrthoFinder output from all 47 species
Als_g47454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.58 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_07921 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04890.1 LOC_Os03g04890 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g01160.1 LOC_Os04g01160 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
LOC_Os10g32760.1 LOC_Os10g32760 Probable E3 ubiquitin-protein ligase WAVH2... 0.03 OrthoFinder output from all 47 species
Lfl_g21332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_7835328g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g056140.4.1 Solyc05g056140 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g10599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e004621_P001 Zm00001e004621 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e040461_P002 Zm00001e040461 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041206_P001 Zm00001e041206 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 68 97
IPR032838 Vwaint_dom 397 452
No external refs found!