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  5. GSVIVT01016235001

GSVIVT01016235001 (WCRKC2)


Aliases : WCRKC2

Description : Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0003501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016235001

Target Alias Description ECC score Gene Family Method Actions
AT5G04260 WCRKC2 WCRKC thioredoxin 2 0.03 OrthoFinder output from all 47 species
Cba_g78057 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01274 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04352 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13155 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10427 WCRKC2 Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g05918 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02704 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07535 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19467 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31755 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07708 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 88 180
No external refs found!