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  5. GSVIVT01016076001

GSVIVT01016076001 (RAD23B, RAD23)


Aliases : RAD23B, RAD23

Description : Ubiquitin receptor RAD23b OS=Arabidopsis thaliana


Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016076001

Target Alias Description ECC score Gene Family Method Actions
Adi_g058741 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Adi_g081473 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Adi_g123403 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Aop_g10404 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G041900.1 RAD23B, RAD23,... ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.21 RAD23D Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g08300.1 RAD23B, RAD23,... shuttle protein (RAD23) 0.03 OrthoFinder output from all 47 species
Lfl_g01373 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g09383 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g117780.2.1 RAD23B, RAD23,... shuttle protein (RAD23) 0.04 OrthoFinder output from all 47 species
Zm00001e025088_P005 RAD23B, RAD23,... shuttle protein (RAD23) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 177 214
IPR015940 UBA 355 390
IPR015360 XPC-bd 274 329
IPR000626 Ubiquitin-like_dom 3 76
No external refs found!